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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902946.1_cds_XP_016452944.1_47122
CDS Infomation

[gene=LOC107777442] [db_xref=GeneID:107777442] [protein=ubiquitin-like-conjugating enzyme ATG10 isoform X1] [protein_id=XP_016452944.1] [location=complement(join(71522..71770,72719..72816,73366..73465,74079..74162,74301..74609))] [gbkey=CDS]
Sequence

ATGCCATCAGATAAGGCCCTAATTAACATCTCCACTTGGGATGGCACCATTACATCTACT
GATTTTTACGTTGCTGCTGTTAATTTTGCTGAGCAATGGAACAATTTAGATCTAGGGTTT
CCTCACTGGTCATGGATCAACTGTCCAAAGGGACCACTGCTTGCTGCTAGCAAGGTTGGT
CTTTGTGCATTTGCTTTATATATATGCTTTCGGCTTGTTCTATATATTATTACTACTTGT
ATTCTGCAATTTGGGCAGGTAGAAGGATATTTATCATTGGAGAATATGATTCTCCCCGGA
TCTGCTGAGGATGATCGCAATGAATGTGGTCTTGCTGGAATAGAAGATTTGACTTGCTCT
AACGAAGATGTATTTAGTGATACTGCCATATTGGTTCAAAAGCACAGCCAGGAAAGACAT
CATTATGACTTCCATGTCGTCTACAGTTCCTCTTTCAGGGTTCCGGTGCTATATTTCCGT
GCATACTGCAGTGATGGAGAACCCTTGGCAAAAGAAGACCTGGAAAGAGACCTTCCAGCT
TATACTGCACAAGAATTAGCAATATCAAAATGGACTTTTATGACTCAGGAGGAGCACCCC
TACCTGAATCGGCCGTGGTACACATTACATCCATGTGGAACTGGTGACTGGATGAAGCTA
CTTTTCAGTAATGAACCTTCAGCGGTGTCTCAAGGTGGAGTTGCAGTTGAGAAATATATG
ATCTCATGGTTTTCAGTTGTGTGTCCGATCTTTGGTCTTAAAATCCCCTTAAAATTGTTT
GTAAATGTGTCTAGCTGTATAACTGTTCAACCAACAAGTCTGAAAATGTTTCTGATGTAA

Peptide Sequence

PEP ID

XP_016452944.1
PEP Infomation

PREDICTED: ubiquitin-like-conjugating enzyme ATG10 isoform X1 [Nicotiana tabacum]
Sequence

MPSDKALINISTWDGTITSTDFYVAAVNFAEQWNNLDLGFPHWSWINCPKGPLLAASKVG
LCAFALYICFRLVLYIITTCILQFGQVEGYLSLENMILPGSAEDDRNECGLAGIEDLTCS
NEDVFSDTAILVQKHSQERHHYDFHVVYSSSFRVPVLYFRAYCSDGEPLAKEDLERDLPA
YTAQELAISKWTFMTQEEHPYLNRPWYTLHPCGTGDWMKLLFSNEPSAVSQGGVAVEKYM
ISWFSVVCPIFGLKIPLKLFVNVSSCITVQPTSLKMFLM

Transcript Sequence

Gene sequence data has not been registered.